---
title: Install shapeit on CentOS using the Snap Store | Snapcraft
description: Get the latest version of shapeit for on CentOS - Segmented HAPlotype
  Estimation and Imputation Tool
url: https://snapcraft.io/install/rjd-shapeit/centos
---

[Canonical Snapcraft](https://snapcraft.io/)

# Install shapeit on **CentOS**

# shapeit (rjd-shapeit)

[Ryan Daniels (jryan-daniels)](https://snapcraft.io/publisher/jryan-daniels "View all snaps from Ryan Daniels (jryan-daniels)")

* [Ryan Daniels (jryan-daniels)](https://snapcraft.io/publisher/jryan-daniels "View all snaps from Ryan Daniels (jryan-daniels)")
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[Install](https://snapcraft.io/install/rjd-shapeit/centos#install)

#### Segmented HAPlotype Estimation and Imputation Tool

"Segmented HAPlotype Estimation and Imputation Tool."

* The description above refers to the software: <https://github.com/odelaneau/shapeit5.git>
* I have packaged the software as a snap for **personal use** but I have made the snap available for free.
* I do not maintain the software itself. I only maintain the snap packaging. Please report software bugs to the maintainers.
* Report snap-specific bugs to me.
* I *DO* use this snap. It *has passed ALL the provided tests* on my system. I **do not** track the latest version.
* Packaging 'style' : tarball build for linux machines.
* License refers to the original software, not the snapcraft 'code'.
* More info:
* Run the following to rename the snap
  ```sudo snap alias rjd-shapeit.ligate-static ligate\_static```
  ```sudo snap alias rjd-shapeit.phase-common-static phase\_common\_static```
  ```sudo snap alias rjd-shapeit.phase-rare-static phase\_rare\_static```
  ```sudo snap alias rjd-shapeit.simulate-static simulate\_static```
  ```sudo snap alias rjd-shapeit.switch-static switch\_static```
  ```sudo snap alias rjd-shapeit.xcftools-static xcftools\_static```

### Package name

* rjd-shapeit

---

### License

* unset

---

### Last updated

* 4 January 2024 - latest/stable
* 6 October 2026 - latest/edge

---

### Websites

* [github.com/RJDan/shapeit\_snap](https://github.com/RJDan/shapeit_snap "https://github.com/RJDan/shapeit_snap")

---

### Contact

* [github.com/RJDan/shapeit\_snap](https://github.com/RJDan/shapeit_snap "https://github.com/RJDan/shapeit_snap")

---

### Source code

* [github.com/RJDan/shapeit\_snap](https://github.com/RJDan/shapeit_snap "https://github.com/RJDan/shapeit_snap")

---

##### Report a Snap Store violation

* [Report this Snap](https://snapcraft.io/install/rjd-shapeit/centos#report-snap-modal)

---

## Enable snaps on CentOS and install shapeit

Snaps are applications packaged with all their dependencies to run on all popular Linux distributions from a single build. They update automatically and roll back gracefully.

Snaps are discoverable and installable from the [Snap Store](https://snapcraft.io/store), an app store with an audience of millions.

### Enable snapd

Snap is available for [CentOS 7.6+](https://snapcraft.io/install/rjd-shapeit/centos), and Red Hat Enterprise Linux 7.6+, from the [Extra Packages for Enterprise Linux](https://fedoraproject.org/wiki/EPEL) (EPEL) repository. The EPEL repository can be added to your system with the following command:

```
sudo yum install epel-release
```

Snap can now be installed as follows:

```
sudo yum install snapd
```

Once installed, the *systemd* unit that manages the main snap communication socket needs to be enabled:

```
sudo systemctl enable --now snapd.socket
```

To enable *classic* snap support, enter the following to create a symbolic link between `/var/lib/snapd/snap` and `/snap`:

```
sudo ln -s /var/lib/snapd/snap /snap
```

Either log out and back in again, or restart your system, to ensure snap’s paths are updated correctly.

### Install shapeit

To install shapeit, simply use the following command:

```
sudo snap install rjd-shapeit
```

### Other popular snaps…

[See more...](https://snapcraft.io/search?categories=featured)

[See more in Featured](https://snapcraft.io/search?categories=featured)

### More things to do…

#### [Get the snap store](https://snapcraft.io/snap-store)

Browse and find snaps from the convenience of your desktop using the snap store snap.

#### [Learn more about snaps](https://snapcraft.io/docs)

Interested to find out more about snaps? Want to publish your own application? Visit [snapcraft.io](https://snapcraft.io/) now.

[Back to top](https://snapcraft.io/install/rjd-shapeit/centos)

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