---
title: Install shapeit on Linux | Snap Store
description: Get the latest version of shapeit for Linux - Segmented HAPlotype Estimation
  and Imputation Tool
url: https://snapcraft.io/rjd-shapeit
---

# shapeit (rjd-shapeit)

[Ryan Daniels (jryan-daniels)](https://snapcraft.io/publisher/jryan-daniels "View all snaps from Ryan Daniels (jryan-daniels)")

* [Ryan Daniels (jryan-daniels)](https://snapcraft.io/publisher/jryan-daniels "View all snaps from Ryan Daniels (jryan-daniels)")
* [Education](https://snapcraft.io/search?categories=education)
* [Science](https://snapcraft.io/search?categories=science)

latest/stable 5.1.1

Install latest/stable of shapeit

This channel hasn't been updated in a while. It might be unmaintained and have stability or security issues.

---

**Install using the command line**

```
sudo snap install rjd-shapeit
```

Don't have snapd? [Get set up for snaps](https://snapcraft.io/docs/installing-snapd).

---

### Package name

* rjd-shapeit

---

### License

* unset

---

### Last updated

* 4 January 2024 - latest/stable
* 6 October 2026 - latest/edge

---

### Websites

* [github.com/RJDan/shapeit\_snap](https://github.com/RJDan/shapeit_snap "https://github.com/RJDan/shapeit_snap")

---

### Contact

* [github.com/RJDan/shapeit\_snap](https://github.com/RJDan/shapeit_snap "https://github.com/RJDan/shapeit_snap")

---

### Source code

* [github.com/RJDan/shapeit\_snap](https://github.com/RJDan/shapeit_snap "https://github.com/RJDan/shapeit_snap")

---

##### Report a Snap Store violation

* [Report this Snap](https://snapcraft.io/rjd-shapeit#report-snap-modal)

---

* [Description](https://snapcraft.io/rjd-shapeit#tab-description)
* [Security](https://snapcraft.io/rjd-shapeit#tab-security)

#### Segmented HAPlotype Estimation and Imputation Tool

"Segmented HAPlotype Estimation and Imputation Tool."

* The description above refers to the software: <https://github.com/odelaneau/shapeit5.git>
* I have packaged the software as a snap for **personal use** but I have made the snap available for free.
* I do not maintain the software itself. I only maintain the snap packaging. Please report software bugs to the maintainers.
* Report snap-specific bugs to me.
* I *DO* use this snap. It *has passed ALL the provided tests* on my system. I **do not** track the latest version.
* Packaging 'style' : tarball build for linux machines.
* License refers to the original software, not the snapcraft 'code'.
* More info:
* Run the following to rename the snap
  ```sudo snap alias rjd-shapeit.ligate-static ligate\_static```
  ```sudo snap alias rjd-shapeit.phase-common-static phase\_common\_static```
  ```sudo snap alias rjd-shapeit.phase-rare-static phase\_rare\_static```
  ```sudo snap alias rjd-shapeit.simulate-static simulate\_static```
  ```sudo snap alias rjd-shapeit.switch-static switch\_static```
  ```sudo snap alias rjd-shapeit.xcftools-static xcftools\_static```

---

## Install shapeit on your Linux distribution

Choose your Linux distribution to get detailed installation instructions. If yours is not shown, get more details on the [installing snapd documentation](https://snapcraft.io/docs/installing-snapd).

[### Arch Linux](https://snapcraft.io/install/rjd-shapeit/arch)

[### CentOS](https://snapcraft.io/install/rjd-shapeit/centos)

[### Debian](https://snapcraft.io/install/rjd-shapeit/debian)

[### elementary OS](https://snapcraft.io/install/rjd-shapeit/elementary)

[### Fedora](https://snapcraft.io/install/rjd-shapeit/fedora)

[### KDE Neon](https://snapcraft.io/install/rjd-shapeit/kde-neon)

[### Kubuntu](https://snapcraft.io/install/rjd-shapeit/kubuntu)

[### Manjaro](https://snapcraft.io/install/rjd-shapeit/manjaro)

[### Pop!\_OS](https://snapcraft.io/install/rjd-shapeit/pop)

[### openSUSE](https://snapcraft.io/install/rjd-shapeit/opensuse)

[### Red Hat Enterprise Linux](https://snapcraft.io/install/rjd-shapeit/rhel)

[### Ubuntu](https://snapcraft.io/install/rjd-shapeit/ubuntu)

[### Raspberry Pi](https://snapcraft.io/install/rjd-shapeit/raspbian)