xsamkit snap

xsamkit

SBL UK c.i.c (sblukcic)

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sam file format processing and filtering

Xsamkit has been created as a set of tools for working with the .Xsam file format. It contains conversion tools, to convert from .sam (sequence alignment mapping) format to .Xsam (extended sequence alignment mapping) format, as well as conversion from .Xsam to .sam, .fastq and more. Xsamkit also contains a multitude of filtering options that allows fast querying of the .Xsam file.

Documentation is hosted on [gitlab](https://sblukcic.gitlab.io/xsamkit/)

If non-home directory is used, access to removable media is required: sudo snap connect xsamkit:removable-media

Icon by: https://www.flaticon.com/authors/vitaly-gorbachev

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Details for xsamkit

LicenseCC-BY-NC-SA-4.0
Last updated27 March 2019

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